annotate PRICAT/PRICAT.xml @ 0:4afc1a0d1f11 default tip

Migrated tool version 1.0 from old tool shed archive to new tool shed repository
author josemuino
date Tue, 07 Jun 2011 17:25:24 -0400
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4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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1 <?xml version="1.0"?>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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2 <!--
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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3 If the value of 'URL_method' is 'get', the request will consist of the value of 'URL' coming back in
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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4 the initial response. If value of 'URL_method' is 'post', any additional params coming back in the
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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5 initial response ( in addition to 'URL' ) will be encoded and appended to URL and a post will be performed.
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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6 -->
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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7 <tool name="Get Data from PRICAT" id="PRICAT_test" tool_type="data_source" version="1.0">
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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8 <description>server</description>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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9 <command interpreter="python">data_source.py $output $__app__.config.output_size_limit</command>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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10 <inputs action="http://www.ab.wur.nl/pricat/4galaxy/pricat4galaxy.html" check_values="false" method="post" target="_top">
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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11 <display>go to PRICAT server $GALAXY_URL</display>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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12 <param name="GALAXY_URL" type="baseurl" value="/tool_runner?tool_id=pricat" />
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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13 </inputs>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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14 <request_param_translation>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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15 <request_param galaxy_name="URL_method" remote_name="URL_method" missing="post" />
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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16 <request_param galaxy_name="URL" remote_name="URL" missing="" />
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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17 <request_param galaxy_name="name" remote_name="name" missing="DNA binding events" />
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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18 <request_param galaxy_name="dbkey" remote_name="db" missing="TAIR9" />
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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19 <request_param galaxy_name="data_type" remote_name="data_type" missing="csv" />
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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20 </request_param_translation>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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21 <uihints minwidth="800"/>
4afc1a0d1f11 Migrated tool version 1.0 from old tool shed archive to new tool shed repository
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22 <outputs>
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23 <data name="output" format="interval" />
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24 </outputs>
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25 <options sanitize="False" refresh="True"/>
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26 </tool>