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4
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1 #!/usr/bin/env python
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2
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3 import sys
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4 import argparse as ap
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5
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6 parser = ap.ArgumentParser(prog='filler', conflict_handler='resolve',
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7 description="produce filler collection to deal with galaxy handling")
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8
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9 input = parser.add_argument_group('Input', '')
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8
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10 input.add_argument('-i', '--input', nargs=1, required=True, help="Paths to (forward) reads")
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4
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11 input.add_argument('-o', '--output', nargs=1, required=True, help="output")
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12
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13 if len(sys.argv) == 0:
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14 parser.print_usage()
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15 sys.exit(1)
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16
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17 args = parser.parse_args()
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18 output = open(args.output[0], 'w')
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19 output.write(args.input[0])
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20 output.write("\n")
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