Mercurial > repos > koen > gbsx

comparison tool_dependencies.xml @ 22:062399f3787f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
new version of gbsx: v1.2 with barcodeGenerator, demultiplex and digest
author koen
date Tue, 26 Jan 2016 07:38:36 -0500
parents efd8c94168d4
children 3b325560887b
comparison
equal deleted inserted replaced
21:32ee036c156a 22:062399f3787f
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="GBSX" version="1.1.5"> 3 <package name="GBSX" version="1.2">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url">https://github.com/GenomicsCoreLeuven/GBSX/releases/download/v1.1.5/GBSX_v1.1.5.jar</action> 6 <action type="download_by_url">https://github.com/GenomicsCoreLeuven/GBSX/releases/download/v1.2/GBSX_v1.2.jar</action>
7 <action type="move_file" rename_to="GBSX.jar"><source>GBSX_v1.1.5.jar</source><destination>$INSTALL_DIR</destination></action> 7 <action type="move_file" rename_to="GBSX.jar"><source>GBSX_v1.2.jar</source><destination>$INSTALL_DIR</destination></action>
8 <action type="download_by_url">https://github.com/GenomicsCoreLeuven/GBSX/releases/download/v1.2/GBSX_digest_v1.1.pl</action>
9 <action type="move_file" rename_to="GBSX_digest.pl"><source>GBSX_digest_v1.1.pl</source><destination>$INSTALL_DIR</destination></action>
8 <action type="set_environment"> 10 <action type="set_environment">
9 <environment_variable name="GBSX_PATH" action="set_to">$INSTALL_DIR</environment_variable> 11 <environment_variable name="GBSX_PATH" action="set_to">$INSTALL_DIR</environment_variable>
10 </action> 12 </action>
11 </actions> 13 </actions>
12 </install> 14 </install>
13 <readme>Installs the GBSX jar.</readme> 15 <readme>Installs the GBSX jar.</readme>
14 </package> 16 </package>
17 <package name="bioperl" version="1.6.922">
18 <repository name="package_bioperl_1_6" changeset_revision="0:5ef71da82044" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu/" />
19 </package>
15 </tool_dependency> 20 </tool_dependency>