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1 Generic Filter
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2 =======
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3
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4 Metadata
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5 -----------
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6
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7 * **@name**: Generic Filter
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8 * **@version**: 2020.01
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9 * **@authors**: Marion Landi and Melanie Petera for first version - Maintainer: Melanie Petera (PFEM ; INRAE ; MetaboHUB)
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10 * **@init date**: 2014, december
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11 * **@main usage**: This tool allows to remove all samples and/or variables corresponding to specific values regarding designated factors or numerical variables.
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12
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13
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14 Context
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15 -----------
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16
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17 This tool is provided as one of the [Workflow4Metabolomics](http://workflow4metabolomics.org) Galaxy instance utilities. W4M is a French infrastructure providing software tools to process, analyse and annotate metabolomics data.
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18
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19 User interface is based on the Galaxy platform (homepage: https://galaxyproject.org/). It is an open, web-based platform for data intensive biomedical research. Whether on the free public server or your own instance, you can perform, reproduce, and share complete analyses.
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20
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21
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22 Configuration
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23 -----------
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24
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25 ### Requirement:
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26 * R software: version > 3.0.0 recommended
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27 * Specific R library: 'batch'
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28
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29 ### Docker:
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30 * Use of this tool in a docker context:
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31 Information is provided in the [about_docker.md file](about_docker.md).
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32
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33
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34 Technical description
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35 -----------
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36
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37 Main files:
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38
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39 - filter_script.R: R function (core script)
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40 - filter_wrap.R: R script to link the main R function to inputs
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41 - generic_filter.xml: XML wrapper (interface for Galaxy)
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42
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43
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44 Services provided
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45 -----------
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46
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47 * Help and support: support@workflow4metabolomics.org
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48
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49
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50 License
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51 -----------
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52
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53 * Cea Cnrs Inria Logiciel Libre License, version 2.1 (CECILL-2.1)
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