Mercurial > repos > metexplore > met4j

comparison tools/tool_conf.xml @ 8:1274e2a62479 draft default tip

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planemo upload for repository https://forgemia.inra.fr/metexplore/met4j-galaxy commit e34acf0f51cafcf6ae7c97b4feb3188a39f17c32
author metexplore
date Wed, 26 Jul 2023 15:33:45 +0000
parents 1436e9cde9c9
children
comparison
equal deleted inserted replaced
7:1436e9cde9c9 8:1274e2a62479
25 <tool file="met4j/convert/Sbml2Graph/Sbml2Graph.xml"/> 25 <tool file="met4j/convert/Sbml2Graph/Sbml2Graph.xml"/>
26 <tool file="met4j/convert/Sbml2Tab/Sbml2Tab.xml"/> 26 <tool file="met4j/convert/Sbml2Tab/Sbml2Tab.xml"/>
27 <tool file="met4j/convert/Tab2Sbml/Tab2Sbml.xml"/> 27 <tool file="met4j/convert/Tab2Sbml/Tab2Sbml.xml"/>
28 <section id="met4j_mapping" name="Met4J - mapping"/> 28 <section id="met4j_mapping" name="Met4J - mapping"/>
29 <tool file="met4j/mapping/NameMatcher/NameMatcher.xml"/> 29 <tool file="met4j/mapping/NameMatcher/NameMatcher.xml"/>
30 <tool file="met4j/mapping/ORApathwayEnrichment/ORApathwayEnrichment.xml"/>
30 <section id="met4j_networkanalysis" name="Met4J - networkAnalysis"/> 31 <section id="met4j_networkanalysis" name="Met4J - networkAnalysis"/>
31 <tool file="met4j/networkAnalysis/BipartiteDistanceMatrix/BipartiteDistanceMatrix.xml"/> 32 <tool file="met4j/networkAnalysis/BipartiteDistanceMatrix/BipartiteDistanceMatrix.xml"/>
32 <tool file="met4j/networkAnalysis/CarbonSkeletonNet/CarbonSkeletonNet.xml"/> 33 <tool file="met4j/networkAnalysis/CarbonSkeletonNet/CarbonSkeletonNet.xml"/>
33 <tool file="met4j/networkAnalysis/ChemSimilarityWeighting/ChemSimilarityWeighting.xml"/> 34 <tool file="met4j/networkAnalysis/ChemSimilarityWeighting/ChemSimilarityWeighting.xml"/>
34 <tool file="met4j/networkAnalysis/ChokePoint/ChokePoint.xml"/> 35 <tool file="met4j/networkAnalysis/ChokePoint/ChokePoint.xml"/>
41 <tool file="met4j/networkAnalysis/LoadPoint/LoadPoint.xml"/> 42 <tool file="met4j/networkAnalysis/LoadPoint/LoadPoint.xml"/>
42 <tool file="met4j/networkAnalysis/MetaboRank/MetaboRank.xml"/> 43 <tool file="met4j/networkAnalysis/MetaboRank/MetaboRank.xml"/>
43 <tool file="met4j/networkAnalysis/NetworkSummary/NetworkSummary.xml"/> 44 <tool file="met4j/networkAnalysis/NetworkSummary/NetworkSummary.xml"/>
44 <tool file="met4j/networkAnalysis/PathwayNet/PathwayNet.xml"/> 45 <tool file="met4j/networkAnalysis/PathwayNet/PathwayNet.xml"/>
45 <tool file="met4j/networkAnalysis/PrecursorNetwork/PrecursorNetwork.xml"/> 46 <tool file="met4j/networkAnalysis/PrecursorNetwork/PrecursorNetwork.xml"/>
47 <tool file="met4j/networkAnalysis/ReactionDistanceMatrix/ReactionDistanceMatrix.xml"/>
46 <tool file="met4j/networkAnalysis/ScopeNetwork/ScopeNetwork.xml"/> 48 <tool file="met4j/networkAnalysis/ScopeNetwork/ScopeNetwork.xml"/>
47 <tool file="met4j/networkAnalysis/SeedsAndTargets/SeedsAndTargets.xml"/> 49 <tool file="met4j/networkAnalysis/SeedsAndTargets/SeedsAndTargets.xml"/>
48 <tool file="met4j/networkAnalysis/SideCompoundsScan/SideCompoundsScan.xml"/> 50 <tool file="met4j/networkAnalysis/SideCompoundsScan/SideCompoundsScan.xml"/>
51 <tool file="met4j/networkAnalysis/TopologicalPathwayAnalysis/TopologicalPathwayAnalysis.xml"/>
49 <section id="met4j_reconstruction" name="Met4J - reconstruction"/> 52 <section id="met4j_reconstruction" name="Met4J - reconstruction"/>
50 <tool file="met4j/reconstruction/SbmlCheckBalance/SbmlCheckBalance.xml"/> 53 <tool file="met4j/reconstruction/SbmlCheckBalance/SbmlCheckBalance.xml"/>
51 </toolbox> 54 </toolbox>