Mercurial > repos > mingchen0919 > aurora_skewer_site
view command-line-arguments.csv @ 0:a42e58c71e5b draft default tip
planemo upload commit 841d8b22bf9f1aaed6bfe8344b60617f45b275b2-dirty
author | mingchen0919 |
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date | Sun, 30 Dec 2018 12:55:49 -0500 |
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short flag,argument mask,data type,variable name o,1,character,report d,1,character,report.files_path A,1,character,first_reads B,1,character,second_reads x,1,character,adapter_first_reads y,1,character,adapter_second_reads m,1,character,trimming_mode r,1,character,maximum_allowed_error_rate D,1,character,maximum_allowed_indel_error_rate q,1,character,quality_trimming_3_end Q,1,character,mean_quality l,1,character,minimum_read_length j,1,character,advanced_options.junction_adapter M,1,character,advanced_options.tab_adapter b,1,character,advanced_options.barcode c,1,character,advanced_options.cut n,1,character,advanced_options.filter_degenerative_reads u,1,character,advanced_options.filter_undetermined_mate_pair_reads f,1,character,advanced_options.format z,1,character,advanced_options.compress E,1,character,advanced_options.qiime F,1,character,advanced_options.quiet i,1,character,advanced_options.intelligent 1,1,character,trimmed_r1 2,1,character,trimmed_r2 3,1,character,trimmed_s