annotate tool_dependencies.xml @ 0:d2e46adc199e draft

planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
author nick
date Mon, 23 Nov 2015 22:06:21 -0500
parents
children b63d6673f883
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
1 <?xml version="1.0"?>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
2 <tool_dependency>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
3 <package name="mafft" version="7.221">
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
4 <repository changeset_revision="d71e007323d4" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" />
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
5 </package>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
6 <package name="duplex" version="0.1">
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
7 <install version="1.0">
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
8 <actions>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
9 <action type="download_by_url">https://github.com/makrutenko/duplex/archive/master.tar.gz</action>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
10 <action type="shell_command">make</action>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
11 <action type="move_directory_files">
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
12 <source_directory>.</source_directory>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
13 <destination_directory>$INSTALL_DIR</destination_directory>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
14 </action>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
15 <action type="set_environment">
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
16 <environment_variable action="set_to" name="DUPLEX_DIR">$INSTALL_DIR</environment_variable>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
17 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
18 </action>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
19 </actions>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
20 </install>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
21 </package>
d2e46adc199e planemo upload commit 35b743e6492923c0e2b1e5e434eaf4e56d268108
nick
parents:
diff changeset
22 </tool_dependency>