view snpEff_2_1a/snpEff_2_1a/scripts/filterOutBoringPredictions.sh @ 3:c052639fa666 default tip

Uploaded
author pcingola
date Fri, 20 Apr 2012 11:22:59 -0400
parents
children
line wrap: on
line source

#!/bin/sh

# Remove some (boring) predictions
grep -v DOWNSTREAM \
	| grep -v UPSTREAM \
	| grep -v INTRON \
	| grep -v UTR_5_PRIME \
	| grep -v UTR_3_PRIME \
	| grep -v INTERGENIC \
	| grep -v "	SYNONYMOUS_CODING" \
	| grep -v WITHIN_NON_CODING_GENE