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comparison msfilt.xml @ 18:ad911e9aaf33

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small fix in msfilt report output
author pieter.lukasse@wur.nl
date Fri, 01 Aug 2014 17:22:37 +0200
parents 40ec8770780d
children
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17:40ec8770780d 18:ad911e9aaf33
219 equal to giving it the average value. 219 equal to giving it the average value.
220 220
221 The output report shows some plots that visualize the filtering done. This can help in fine-tuning the right filtering 221 The output report shows some plots that visualize the filtering done. This can help in fine-tuning the right filtering
222 criteria. 222 criteria.
223 223
224
225 *Filter criteria examples for filtering identifications*
226
227 ================================== ===========================================================================
228 Data type Example filter criteria
229 ---------------------------------- ---------------------------------------------------------------------------
230 QExactive/ProteomeDiscoverer data * (qmBSCR<-1.0) or (!isNaN(smPercoProb) and 18-20*smPercoProb>qmBSCR)
231 X!Tandem identifications data * (qmDMP <-0.5 and qmBSCR<-0.5) or (!isNaN(smXTD) and smXTD>0.01)
232 ================================== ===========================================================================
233
234
224 ----- 235 -----
225 236
226 **Output details** 237 **Output details**
227 238
228 *APML output* 239 *APML output*