Mercurial > repos > pieterlukasse > prims_proteomics
diff msfilt.xml @ 18:ad911e9aaf33
small fix in msfilt report output
| author | pieter.lukasse@wur.nl |
|---|---|
| date | Fri, 01 Aug 2014 17:22:37 +0200 |
| parents | 40ec8770780d |
| children |
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--- a/msfilt.xml Mon Apr 14 17:11:33 2014 +0200 +++ b/msfilt.xml Fri Aug 01 17:22:37 2014 +0200 @@ -221,6 +221,17 @@ The output report shows some plots that visualize the filtering done. This can help in fine-tuning the right filtering criteria. + +*Filter criteria examples for filtering identifications* + +================================== =========================================================================== +Data type Example filter criteria +---------------------------------- --------------------------------------------------------------------------- +QExactive/ProteomeDiscoverer data * (qmBSCR<-1.0) or (!isNaN(smPercoProb) and 18-20*smPercoProb>qmBSCR) +X!Tandem identifications data * (qmDMP <-0.5 and qmBSCR<-0.5) or (!isNaN(smXTD) and smXTD>0.01) +================================== =========================================================================== + + ----- **Output details**