Mercurial > repos > q2d2 > qiime2__phylogeny__filter_table
changeset 1:63f054c1fce2 draft
planemo upload for repository https://github.com/qiime2/galaxy-tools/tree/main/tools/suite_qiime2__phylogeny commit 69da7976573cc07a363ac66bdacc9269d7cd3732
| author | q2d2 |
|---|---|
| date | Fri, 13 Jan 2023 22:58:46 +0000 |
| parents | fce718a0b52f |
| children | 05d29a3294de |
| files | qiime2__phylogeny__filter_table.xml test-data/.gitkeep test-data/align_to_tree_mafft_fasttree.test0.rep-seqs.qza |
| diffstat | 2 files changed, 7 insertions(+), 7 deletions(-) [+] |
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--- a/qiime2__phylogeny__filter_table.xml Mon Aug 29 20:14:41 2022 +0000 +++ b/qiime2__phylogeny__filter_table.xml Fri Jan 13 22:58:46 2023 +0000 @@ -1,31 +1,31 @@ <?xml version='1.0' encoding='utf-8'?> <!-- -Copyright (c) 2022, QIIME 2 development team. +Copyright (c) 2023, QIIME 2 development team. Distributed under the terms of the Modified BSD License. (SPDX: BSD-3-Clause) --> <!-- This tool was automatically generated by: - q2galaxy (version: 2022.8.1) + q2galaxy (version: 2022.11.1) for: - qiime2 (version: 2022.8.1) + qiime2 (version: 2022.11.1) --> -<tool name="qiime2 phylogeny filter-table" id="qiime2__phylogeny__filter_table" version="2022.8.0+q2galaxy.2022.8.1.2" profile="22.05" license="BSD-3-Clause"> +<tool name="qiime2 phylogeny filter-table" id="qiime2__phylogeny__filter_table" version="2022.11.1+q2galaxy.2022.11.1.2" profile="22.05" license="BSD-3-Clause"> <description>Remove features from table if they're not present in tree.</description> <requirements> - <container type="docker">quay.io/qiime2/core:2022.8</container> + <container type="docker">quay.io/qiime2/core:2022.11</container> </requirements> <version_command>q2galaxy version phylogeny</version_command> - <command detect_errors="aggressive">q2galaxy run phylogeny filter_table '$inputs'</command> + <command detect_errors="exit_code">q2galaxy run phylogeny filter_table '$inputs'</command> <configfiles> <inputs name="inputs" data_style="paths"/> </configfiles> <inputs> <param name="table" type="data" format="qza" label="table: FeatureTable[Frequency¹ | RelativeFrequency² | PresenceAbsence³]" help="[required] Feature table that features should be filtered from."> <options options_filter_attribute="metadata.semantic_type"> - <filter type="add_value" value="FeatureTable[PresenceAbsence]"/> <filter type="add_value" value="FeatureTable[Frequency]"/> <filter type="add_value" value="FeatureTable[RelativeFrequency]"/> + <filter type="add_value" value="FeatureTable[PresenceAbsence]"/> </options> <validator type="expression" message="Incompatible type">hasattr(value.metadata, "semantic_type") and value.metadata.semantic_type in ['FeatureTable[Frequency]', 'FeatureTable[PresenceAbsence]', 'FeatureTable[RelativeFrequency]']</validator> </param>