Mercurial > repos > rnateam > data_manager_sortmerna_database_downloader

annotate data_manager_conf.xml @ 1:30bb49887172 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 044a991b45c9135339daf138929887cd8e93a1bf
author rnateam
date Tue, 06 Jun 2017 13:40:27 -0400
parents 765f4ec851f0
children 7d2252852f96
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765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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1 <?xml version="1.0"?>
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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2 <data_managers>
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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3 <data_manager tool_file="data_manager/data_manager_sortmerna_download.xml" id="data_manager_sortmerna_download" >
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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4 <data_table name="rRNA_databases"> <!-- Defines a Data Table to be modified. -->
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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5 <output> <!-- Handle the output of the Data Manager Tool -->
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
rnateam
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6 <column name="value" /> <!-- columns that are going to be specified by the Data Manager Tool -->
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
rnateam
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7 <column name="name" /> <!-- columns that are going to be specified by the Data Manager Tool -->
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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8 <column name="path" output_ref="out_file" >
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
rnateam
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9 <move type="file">
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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10 <source>${path}</source>
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30bb49887172 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 044a991b45c9135339daf138929887cd8e93a1bf
rnateam
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11 <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">rRNA_databases/${name}</target>
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765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
rnateam
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12 </move>
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30bb49887172 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 044a991b45c9135339daf138929887cd8e93a1bf
rnateam
parents: 0
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13 <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/rRNA_databases/${name}</value_translation>
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765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
rnateam
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14 <value_translation type="function">abspath</value_translation>
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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15 </column>
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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16 </output>
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
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17 </data_table>
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
rnateam
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18 </data_manager>
765f4ec851f0 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_sortmerna_database_downloader commit 65d322f9ab2f24d65b307f3553589149a1d678d5
rnateam
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19 </data_managers>