Mercurial > repos > shellac > guppy_basecaller

annotate env/lib/python3.7/site-packages/lockfile/sqlitelockfile.py @ 0:26e78fe6e8c4 draft

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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
author shellac
date Sat, 02 May 2020 07:14:21 -0400
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0
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1 from __future__ import absolute_import, division
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2
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3 import time
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4 import os
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5
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6 try:
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7 unicode
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8 except NameError:
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9 unicode = str
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10
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11 from . import LockBase, NotLocked, NotMyLock, LockTimeout, AlreadyLocked
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12
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13
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14 class SQLiteLockFile(LockBase):
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15 "Demonstrate SQL-based locking."
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16
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17 testdb = None
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18
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19 def __init__(self, path, threaded=True, timeout=None):
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20 """
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21 >>> lock = SQLiteLockFile('somefile')
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22 >>> lock = SQLiteLockFile('somefile', threaded=False)
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23 """
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24 LockBase.__init__(self, path, threaded, timeout)
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25 self.lock_file = unicode(self.lock_file)
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26 self.unique_name = unicode(self.unique_name)
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27
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28 if SQLiteLockFile.testdb is None:
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29 import tempfile
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30 _fd, testdb = tempfile.mkstemp()
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31 os.close(_fd)
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32 os.unlink(testdb)
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33 del _fd, tempfile
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34 SQLiteLockFile.testdb = testdb
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35
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36 import sqlite3
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37 self.connection = sqlite3.connect(SQLiteLockFile.testdb)
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38
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39 c = self.connection.cursor()
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40 try:
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41 c.execute("create table locks"
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42 "("
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43 " lock_file varchar(32),"
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44 " unique_name varchar(32)"
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45 ")")
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46 except sqlite3.OperationalError:
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47 pass
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48 else:
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49 self.connection.commit()
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50 import atexit
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51 atexit.register(os.unlink, SQLiteLockFile.testdb)
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52
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53 def acquire(self, timeout=None):
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54 timeout = timeout if timeout is not None else self.timeout
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55 end_time = time.time()
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56 if timeout is not None and timeout > 0:
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57 end_time += timeout
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58
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59 if timeout is None:
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60 wait = 0.1
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61 elif timeout <= 0:
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62 wait = 0
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63 else:
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64 wait = timeout / 10
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65
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66 cursor = self.connection.cursor()
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67
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68 while True:
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69 if not self.is_locked():
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70 # Not locked. Try to lock it.
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71 cursor.execute("insert into locks"
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72 " (lock_file, unique_name)"
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73 " values"
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74 " (?, ?)",
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75 (self.lock_file, self.unique_name))
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76 self.connection.commit()
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77
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78 # Check to see if we are the only lock holder.
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79 cursor.execute("select * from locks"
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80 " where unique_name = ?",
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81 (self.unique_name,))
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82 rows = cursor.fetchall()
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83 if len(rows) > 1:
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84 # Nope. Someone else got there. Remove our lock.
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85 cursor.execute("delete from locks"
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86 " where unique_name = ?",
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87 (self.unique_name,))
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88 self.connection.commit()
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89 else:
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90 # Yup. We're done, so go home.
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91 return
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92 else:
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93 # Check to see if we are the only lock holder.
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94 cursor.execute("select * from locks"
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95 " where unique_name = ?",
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96 (self.unique_name,))
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97 rows = cursor.fetchall()
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98 if len(rows) == 1:
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99 # We're the locker, so go home.
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100 return
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101
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102 # Maybe we should wait a bit longer.
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103 if timeout is not None and time.time() > end_time:
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104 if timeout > 0:
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105 # No more waiting.
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106 raise LockTimeout("Timeout waiting to acquire"
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107 " lock for %s" %
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108 self.path)
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109 else:
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110 # Someone else has the lock and we are impatient..
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111 raise AlreadyLocked("%s is already locked" % self.path)
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112
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113 # Well, okay. We'll give it a bit longer.
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114 time.sleep(wait)
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115
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116 def release(self):
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117 if not self.is_locked():
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118 raise NotLocked("%s is not locked" % self.path)
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119 if not self.i_am_locking():
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120 raise NotMyLock("%s is locked, but not by me (by %s)" %
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121 (self.unique_name, self._who_is_locking()))
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122 cursor = self.connection.cursor()
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123 cursor.execute("delete from locks"
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124 " where unique_name = ?",
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125 (self.unique_name,))
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126 self.connection.commit()
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127
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128 def _who_is_locking(self):
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129 cursor = self.connection.cursor()
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130 cursor.execute("select unique_name from locks"
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131 " where lock_file = ?",
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132 (self.lock_file,))
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133 return cursor.fetchone()[0]
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134
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135 def is_locked(self):
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136 cursor = self.connection.cursor()
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137 cursor.execute("select * from locks"
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138 " where lock_file = ?",
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139 (self.lock_file,))
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140 rows = cursor.fetchall()
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141 return not not rows
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142
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143 def i_am_locking(self):
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144 cursor = self.connection.cursor()
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145 cursor.execute("select * from locks"
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146 " where lock_file = ?"
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147 " and unique_name = ?",
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148 (self.lock_file, self.unique_name))
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149 return not not cursor.fetchall()
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150
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151 def break_lock(self):
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152 cursor = self.connection.cursor()
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153 cursor.execute("delete from locks"
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154 " where lock_file = ?",
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155 (self.lock_file,))
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156 self.connection.commit()