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planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Plateo commit cc895a281863630e391c310322fbddfd31ac1f8f-dirty
| author | tduigou |
|---|---|
| date | Thu, 16 Oct 2025 14:27:06 +0000 |
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LOCUS . 2523 bp DNA UNK 01-JAN-1980 DEFINITION . ACCESSION <unknown id> VERSION <unknown id> KEYWORDS . SOURCE . ORGANISM . . FEATURES Location/Qualifiers terminator 392..419 /note="T7Te terminator" /note="phage T7 early transcription terminator" rep_origin complement(431..1018) /direction=LEFT /note="ori" /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" terminator 1040..1069 /note="T3Te terminator" /note="phage T3 early transcription terminator" misc_feature 1143..1148 /note="BsmBI" source 5..1149 /source="Exported" CDS 1154..1861 /codon_start=1 /note="mRuby2" /product="monomeric red fluorescent protein derived from mRuby, with improved photophysical properties (Lam et al., 2012)" /translation="VSKGEELIKENMRMKVVMEGSVNGHQFKCTGEGEGNPYMGTQTMR IKVIEGGPLPFAFDILATSFMYGSRTFIKYPKGIPDFFKQSFPEGFTWERVTRYEDGGV VTVMQDTSLEDGCLVYHVQVRGVNFPSNGPVMQKKTKGWEPNTEMMYPADGGLRGYTHM ALKVDGGGHLSCSFVTTYRSKKTVGNIKMPGIHAVDHRLERLEESDNEMFVVQREHAVA KFAGLGGGMDELYK" source 1154..1863 /source="Exported" misc_feature complement(1869..1874) /note="BsmBI" terminator 1941..1972 /note="tonB terminator" /note="bidirectional E. coli tonB-P14 transcription terminator" promoter 1973..2075 /note="cat promoter" /note="promoter of the E. coli cat gene" source 1868..2523 /source="Exported" ORIGIN 1 ctcaggcgca atcacgaatg aataacggtt tggttggtgc gagtgatttt gatgacgagc 61 gtaatggctg gcctgttgaa caagtctgga aagaaatgca taagcttttg ccattctcac 121 cggattcagt cgtcactcat ggtgatttct cacttgataa ccttattttt gacgagggga 181 aattaatagg ttgtattgat gttggacgag tcggaatcgc agaccgatac caggatcttg 241 ccatcctatg gaactgcctc ggtgagtttt ctccttcatt acagaaacgg ctttttcaaa 301 aatatggtat tgataatcct gatatgaata aattgcagtt tcacttgatg ctcgatgagt 361 ttttctaatg agggcccaaa tgtaatcacc tggctcacct tcgggtgggc ctttctgcgt 421 tgctggcgtt tttccatagg ctccgccccc ctgacgagca tcacaaaaat cgatgctcaa 481 gtcagaggtg gcgaaacccg acaggactat aaagatacca ggcgtttccc cctggaagct 541 ccctcgtgcg ctctcctgtt ccgaccctgc cgcttaccgg atacctgtcc gcctttctcc 601 cttcgggaag cgtggcgctt tctcatagct cacgctgtag gtatctcagt tcggtgtagg 661 tcgttcgctc caagctgggc tgtgtgcacg aaccccccgt tcagcccgac cgctgcgcct 721 tatccggtaa ctatcgtctt gagtccaacc cggtaagaca cgacttatcg ccactggcag 781 cagccactgg taacaggatt agcagagcga ggtatgtagg cggtgctaca gagttcttga 841 agtggtggcc taactacggc tacactagaa gaacagtatt tggtatctgc gctctgctga 901 agccagttac ctcggaaaaa gagttggtag ctcttgatcc ggcaaacaaa ccaccgctgg 961 tagcggtggt ttttttgttt gcaagcagca gattacgcgc agaaaaaaag gatctcaaga 1021 agatcctttg attttctacc gaagaaaggc ccacccgtga aggtgagcca gtgagttgat 1081 tgcagtccag ttacgctgga gtctgaggct cgtcctgaat gatatcaagc ttgaattcgt 1141 tacgtctcgc agcgtgtcta agggcgaaga gctgatcaag gaaaatatgc gtatgaaggt 1201 ggtcatggaa ggttcggtca acggccacca attcaaatgc acaggtgaag gagaaggcaa 1261 tccgtacatg ggaactcaaa ccatgaggat caaagtcatc gagggaggac ccctgccatt 1321 tgcctttgac attcttgcca cgtcgttcat gtatggcagc cgtactttta tcaagtaccc 1381 gaaaggcatt cctgatttct ttaaacagtc ctttcctgag ggttttactt gggaaagagt 1441 tacgagatac gaagatggtg gagtcgtcac cgtcatgcag gacaccagcc ttgaggatgg 1501 ctgtctcgtt taccacgtcc aagtcagagg ggtaaacttt ccctccaatg gtcccgtgat 1561 gcagaagaag accaagggtt gggagcctaa tacagagatg atgtatccag cagatggtgg 1621 tctgagggga tacactcata tggcactgaa agttgatggt ggtggccatc tgtcttgctc 1681 tttcgtaaca acttacaggt caaaaaagac cgtcgggaac atcaagatgc ccggtatcca 1741 tgccgttgat caccgcctgg aaaggttaga ggaaagtgac aatgaaatgt tcgtagtaca 1801 acgcgaacac gcagttgcca agttcgccgg gcttggtggt gggatggacg agctgtacaa 1861 gtcaggccga gacgaagacg aattctctag atatcgctca atactgacca tttaaatcat 1921 acctgacctc catagcagaa agtcaaaagc ctccgaccgg aggcttttga cttgatcggc 1981 acgtaagagg ttccaacttt caccataatg aaataagatc actaccgggc gtattttttg 2041 agttatcgag attttcagga gctaaggaag ctaaaatgag ccatattcaa cgggaaacgt 2101 cttgctcgag gccgcgatta aattccaaca tggatgctga tttatatggg tataaatggg 2161 ctcgcgataa tgtcgggcaa tcaggtgcga caatctatcg attgtatggg aagcccgatg 2221 cgccagagtt gtttctgaaa catggcaaag gtagcgttgc caatgatgtt acagatgaga 2281 tggtcaggct aaactggctg acggaattta tgcctcttcc gaccatcaag cattttatcc 2341 gtactcctga tgatgcatgg ttactcacca ctgcgatccc agggaaaaca gcattccagg 2401 tattagaaga atatcctgat tcaggtgaaa atattgttga tgcgctggca gtgttcctgc 2461 gccggttgca ttcgattcct gtttgtaatt gtccttttaa cggcgatcgc gtatttcgtc 2521 tcg //
