Mercurial > repos > tduigou > seq_to_db
view test-data/HC_Amp_ccdB.gb @ 2:dad2c4c3450a draft default tip
planemo upload for repository https://github.com/brsynth/galaxytools/tree/main/tools commit db4ac861e1d03fcdfe94321d858839124e493930-dirty
| author | tduigou |
|---|---|
| date | Wed, 23 Jul 2025 09:44:33 +0000 |
| parents | 9f845ccb1a9f |
| children |
line wrap: on
line source
LOCUS Exported 2721 bp ds-DNA circular SYN 14-SEP-2017 DEFINITION synthetic circular DNA. ACCESSION . VERSION . KEYWORDS HC_Amp_ccdB(1-25).gb SOURCE synthetic DNA construct ORGANISM synthetic DNA construct REFERENCE 1 (bases 1 to 2721) AUTHORS Trial User TITLE Direct Submission JOURNAL Exported Sep 14, 2017 from SnapGene Viewer 4.0.2 http://www.snapgene.com FEATURES Location/Qualifiers source 1..2721 /organism="synthetic DNA construct" /mol_type="other DNA" misc_feature complement(73..78) /label=BsmBI misc_feature 129..462 /label=*ccdB promoter* exon 463..768 /label=ccdB /note="ccdB" terminator 809..880 /note="rrnB T1 terminator transcription terminator T1 from the E. coli rrnB gene" terminator 896..923 /note="T7Te terminator phage T7 early transcription terminator" misc_feature 930..942 /label=BioBrick suffix /note="universal suffix for all parts" misc_feature 943..948 /label=BsmBI terminator 1027..1056 /note="T3Te terminator phage T3 early transcription terminator" rep_origin 1078..1665 /direction=RIGHT /label=ori /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" terminator 1677..1704 /note="T7Te terminator phage T7 early transcription terminator" CDS complement(1728..2588) /codon_start=1 /gene="bla" /product="beta-lactamase" /note="AmpR confers resistance to ampicillin, carbenicillin, and related antibiotics" /translation="MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYI ELDLNSGKILESLRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYS PVTEKHLTDGMTVRELCSAAITMSDNTAANLLLATIGGPKELTAFLHNMGDHVTRLDRW EPELNEAIPNDERDTTMPVAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGSLLRSA LPAGWFIADKSGAGERGSRGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGAS LIKHW" promoter complement(2589..2691) /note="cat promoter promoter of the E. coli cat gene" ORIGIN 1 ctttctgcta tggaggtcag gtatgattta aatggtcagt attgagcgat atctagagaa 61 ttcgtcatag gagagacgca atacgcaaac cgcctctccc cgcgcgttgg ccgattcatt 121 aatgcaggga tccggcttac taaaagccag ataacagtat gcgtatttgc gcgctgattt 181 ttgcggtata agaatatata ctgatatgta tacccgaagt atgtcaaaaa gaggtatgct 241 atgaagcagc gtattacagt gacagttgac agcgacagct atcagttgct caaggcatat 301 atgatgtcaa tatctccggt ctggtaagca caaccatgca gaatgaagcc cgtcgtctgc 361 gtgccgaacg ctggaaagcg gaaaatcagg aagggatggc tgaggtcgcc cggtttattg 421 aaatgaacgg ctcttttgct gacgagaaca ggggctggtg aaatgcagtt taaggtttac 481 acctataaaa gagagagccg ttatcgtctg tttgtggatg tacagagtga tattattgac 541 acgcccgggc gacggatggt gatccccctg gccagtgcac gtctgctgtc agataaagtc 601 ccccgtgaac tttacccggt ggtgcatatc ggggatgaaa gctggcgcat gatgaccacc 661 gatatggcca gtgtgccggt ctccgttatc ggggaagaag tggctgatct cagccaccgc 721 gaaaatgaca tcaaaaacgc cattaacctg atgttctggg gaatataagc tgatagtgct 781 agtgtagatc gctactagag ccaggcatca aataaaacga aaggctcagt cgaaagactg 841 ggcctttcgt tttatctgtt gtttgtcggt gaacgctctc tactagagtc acactggctc 901 accttcgggt gggcctttct gcgtttatat actagtagcg gccgtctcaa cgataacgaa 961 ttcaagcttg atatcattca ggacgagcct cagactccag cgtaactgga ctgcaatcaa 1021 ctcactggct caccttcacg ggtgggcctt tcttcggtag aaaatcaaag gatcttcttg 1081 agatcctttt tttctgcgcg taatctgctg cttgcaaaca aaaaaaccac cgctaccagc 1141 ggtggtttgt ttgccggatc aagagctacc aactcttttt ccgaggtaac tggcttcagc 1201 agagcgcaga taccaaatac tgttcttcta gtgtagccgt agttaggcca ccacttcaag 1261 aactctgtag caccgcctac atacctcgct ctgctaatcc tgttaccagt ggctgctgcc 1321 agtggcgata agtcgtgtct taccgggttg gactcaagac gatagttacc ggataaggcg 1381 cagcggtcgg gctgaacggg gggttcgtgc acacagccca gcttggagcg aacgacctac 1441 accgaactga gatacctaca gcgtgagcta tgagaaagcg ccacgcttcc cgaagggaga 1501 aaggcggaca ggtatccggt aagcggcagg gtcggaacag gagagcgcac gagggagctt 1561 ccagggggaa acgcctggta tctttatagt cctgtcgggt ttcgccacct ctgacttgag 1621 catcgatttt tgtgatgctc gtcagggggg cggagcctat ggaaaaacgc cagcaacgca 1681 gaaaggccca cccgaaggtg agccaggtga ttacatttgg gccctcatta ccaatgctta 1741 atcagtgagg cacctatctc agcgatctgt ctatttcgtt catccatagt tgcctgactc 1801 cccgtcgtgt agataactac gatgcgggag ggcttaccat ctggccccag tgctgcaatg 1861 ataccgcgag aaccacgctc accggctcca gatttatcag caataaacca gccagccggg 1921 agggccgagc gcagaagtga tcctgcaact ttatccgcct ccatccagtc tattaattgt 1981 tgccgggaag ctagagtaag tagttcgcca gttaatagtt tgcgcaacgt tgttgccatt 2041 gctacaggca tcgtggtgtc acgctcgtcg tttggtatgg cttcattcag ctccggttcc 2101 caacgatcaa ggcgagttac atgatccccc atgttgtgca aaaaagcggt tagctccttc 2161 ggtcctccga tcgttgccag aagtaagttg gccgcagtgt tatcactcat ggttatggca 2221 gcactgcata attctcttac tgtcatgcca tccgtgagat gcttttctgt gactggtgag 2281 tactcaacca agtcattctg agaatagtgt atgcggcgac cgagttgctc ttgcccggcg 2341 tcaatacggg ataataccgc gccacatagc agaactttaa aagtgctcat cattggaaaa 2401 cgttcttcgg ggcgtaaact ctcaaggatc ttaccgctgt tgagatccag ttcgatgtaa 2461 cccactcgtg cacccaactg atcttcagca tcttttactt tcaccagcgt ttctgggtga 2521 gcaaaaacag gaaggcaaaa tgccgcaaaa aagggaataa gggcgacacg gaaatgttga 2581 atactcattt tagcttcctt agctcctgaa aatctcgata actcaaaaaa tacgcccggt 2641 agtgatctta tttcattatg gtgaaagttg gaacctctta cgtgccgatc aagtcaaaag 2701 cctccggtcg gaggcttttg a //
