Mercurial > repos > triasteran > trips_bam_to_sqlite
diff trips_create_new_organism/Dockerfile @ 3:b15d43a50435 draft
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author | triasteran |
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date | Tue, 29 Mar 2022 12:41:16 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/trips_create_new_organism/Dockerfile Tue Mar 29 12:41:16 2022 +0000 @@ -0,0 +1,14 @@ +FROM alpine +WORKDIR /tmp +COPY create_annotation_sqlite.py . +RUN chmod +x create_annotation_sqlite.py +RUN ln create_annotation_sqlite.py /usr/local/bin/create_annotation_sqlite +RUN export PATH="$PATH:/usr/local/bin" +ENV PATH="/usr/local/bin:${PATH}" +RUN apk add bash +RUN apk add python3 +RUN apk add py3-pip +RUN pip install --upgrade pip +RUN pip install --no-cache-dir 'pysqlite3==0.4.6' +RUN pip install --no-cache-dir 'regex==2022.1.18' +RUN pip install --no-cache-dir 'intervaltree==3.1.0'