diff trips_create_new_organism/Dockerfile @ 3:b15d43a50435 draft

Uploaded
author triasteran
date Tue, 29 Mar 2022 12:41:16 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/trips_create_new_organism/Dockerfile	Tue Mar 29 12:41:16 2022 +0000
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+FROM alpine
+WORKDIR /tmp 
+COPY create_annotation_sqlite.py . 
+RUN chmod +x create_annotation_sqlite.py
+RUN ln create_annotation_sqlite.py /usr/local/bin/create_annotation_sqlite
+RUN export PATH="$PATH:/usr/local/bin"
+ENV PATH="/usr/local/bin:${PATH}"
+RUN apk add bash
+RUN apk add python3
+RUN apk add py3-pip
+RUN pip install --upgrade pip 
+RUN pip install --no-cache-dir 'pysqlite3==0.4.6'
+RUN pip install --no-cache-dir 'regex==2022.1.18'
+RUN pip install --no-cache-dir 'intervaltree==3.1.0'