Mercurial > repos > triasteran > trips_bam_to_sqlite
view trips_create_new_organism/Dockerfile @ 3:b15d43a50435 draft
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author | triasteran |
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date | Tue, 29 Mar 2022 12:41:16 +0000 |
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FROM alpine WORKDIR /tmp COPY create_annotation_sqlite.py . RUN chmod +x create_annotation_sqlite.py RUN ln create_annotation_sqlite.py /usr/local/bin/create_annotation_sqlite RUN export PATH="$PATH:/usr/local/bin" ENV PATH="/usr/local/bin:${PATH}" RUN apk add bash RUN apk add python3 RUN apk add py3-pip RUN pip install --upgrade pip RUN pip install --no-cache-dir 'pysqlite3==0.4.6' RUN pip install --no-cache-dir 'regex==2022.1.18' RUN pip install --no-cache-dir 'intervaltree==3.1.0'