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1 <?xml version='1.0' encoding='utf-8'?>
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2 <tool_dependency>
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3 <package name="python" version="2.7.10">
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4 <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
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5 </package>
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2
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6 <package name="bintrees" version="2.0.2">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_by_url">https://pypi.python.org/packages/source/b/bintrees/bintrees-2.0.2.tar.gz</action>
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2
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10 <action type="set_environment_for_install">
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11 <repository changeset_revision="0339c4a9b87b" name="package_python_2_7_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
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12 <package name="python" version="2.7.10" />
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13 </repository>
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14 </action>
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15 <action type="make_directory">$INSTALL_DIR/lib/python</action>
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16 <action type="shell_command">
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17 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &&
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18 python setup.py install --install-lib $INSTALL_DIR/lib/python
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19 </action>
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20 <action type="set_environment">
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21 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
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22 <environment_variable action="set_to" name="PYTHONPATH_BINTREES">$INSTALL_DIR/lib/python</environment_variable>
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23 </action>
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24 </actions>
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25 </install>
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26 <readme>
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27 This Galaxy Tool shed package installs bintrees version 2.0.2
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28 (https://pypi.python.org/pypi/PyVCF) package for use with python 2.7.10.
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29 </readme>
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2
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30 </package>
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31 </tool_dependency>
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