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1 <tool id="genbank" name="Connect to Genbank">
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2 <!-- <description>queries genbank</description> -->
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3 <command interpreter="python">genbank.py $mode "$text" $output</command>
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4 <inputs>
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5 <param name="mode" type="select">
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6 <option value="nucleotide">nucleotide database</option>
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7 <option value="protein">proteins database</option>
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8 <label>Get sequences from the</label>
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9 </param>
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10 <param name="text" size="40" type="text" value="6273291">
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11 <label>with accession ID</label>
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12 </param>
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13 </inputs>
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14 <outputs>
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15 <data format="fasta" name="output" />
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16 </outputs>
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17 <help>
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18 At the moment this tool allows the following simple searches:
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19
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20 - by GI: **51594135**
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21 - by accession: **CF622840**
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22 - using text: **human hbb1** (this feature is experimental)
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23 </help>
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24
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25 </tool> |
