Mercurial > repos > yhoogstrate > crossmap

comparison test-data/test_vcf_01_output.vcf @ 0:bfcdabc062ca draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
author yhoogstrate
date Wed, 26 Aug 2015 11:04:47 -0400
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-1:000000000000 0:bfcdabc062ca
1 ##fileformat=VCFv4.2
2 ##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype">
3 ##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities">
4 ##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods">
5 ##liftOverProgram=CrossMap(https://sourceforge.net/projects/crossmap/)
6 ##liftOverFile=test_vcf_01.over.chain
7 ##new_reference_genome=test_vcf_01.fasta
8 ##liftOverTime=August13,2015
9 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMP001 SAMP002
10 2 227 rs11449 C A . PASS . GT 0/0 0/1
11 2 137 rs84825 T C . PASS . GT:GP 0/1:. 0/1:0.03,0.97,0
12 2 36 rs84823 C G . PASS . GT:PL ./.:. 1/1:10,5,0