Mercurial > repos > yhoogstrate > crossmap

diff test-data/test_vcf_01_output.vcf @ 0:bfcdabc062ca draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
author yhoogstrate
date Wed, 26 Aug 2015 11:04:47 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_vcf_01_output.vcf	Wed Aug 26 11:04:47 2015 -0400
@@ -0,0 +1,12 @@
+##fileformat=VCFv4.2
+##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype">
+##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities">
+##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods">
+##liftOverProgram=CrossMap(https://sourceforge.net/projects/crossmap/)
+##liftOverFile=test_vcf_01.over.chain
+##new_reference_genome=test_vcf_01.fasta
+##liftOverTime=August13,2015
+#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	SAMP001	SAMP002
+2	227	rs11449	C	A	.	PASS	.	GT	0/0	0/1
+2	137	rs84825	T	C	.	PASS	.	GT:GP	0/1:.	0/1:0.03,0.97,0
+2	36	rs84823	C	G	.	PASS	.	GT:PL	./.:.	1/1:10,5,0