--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/commons/pyRepetUnit/convCoord/test/Test_ConvPathChr2Chunk.py	Mon Apr 29 03:20:15 2013 -0400
@@ -0,0 +1,110 @@
+from commons.core.utils.FileUtils import FileUtils
+from commons.core.sql.DbFactory import DbFactory
+from commons.pyRepetUnit.convCoord.ConvPathChr2Chunk import ConvPathChr2Chunk
+import unittest
+import os
+
+class Test_ConvPathChr2Chunk(unittest.TestCase):
+
+    def setUp(self):
+        self._pathfilename="dummy.path"
+        self._pathtablename="dummy_path"
+        
+        self._chunkmapfilename="chunk.map"
+        self._chunkmaptable="test_chunk_map"
+        
+        self._resfilename="dummy_res.path"
+        
+        map4convData="chunk1\tchr1\t1\t100\n"
+        map4convData+="chunk2\tchr1\t90\t200\n"
+        map4convData+="chunk3\tchr1\t190\t300\n"
+
+        map4conv=open(self._chunkmapfilename,"w")
+        map4conv.write(map4convData)
+        map4conv.close()
+        
+        self._db = DbFactory.createInstance()
+        self._db.createTable(self._chunkmaptable, "map", self._chunkmapfilename, True)
+        
+        path2convData="1\tchr1\t10\t80\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="1\tchr1\t90\t110\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="2\tchr1\t150\t160\tsub1\t10\t50\t0.01\t1000\t99\n"
+        
+        path2convData+="3\tchr1\t70\t210\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="4\tchr1\t85\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="5\tchr1\t85\t110\tsub1\t10\t50\t0.01\t1000\t99\n"
+        
+        path2convData+="6\tchr1\t10\t80\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="6\tchr1\t90\t110\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="7\tchr1\t150\t160\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="8\tchr1\t190\t300\tsub1\t10\t50\t0.01\t1000\t99\n"
+        
+        path2convData+="9\tchr1\t70\t210\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="10\tchr1\t85\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="11\tchr1\t85\t110\tsub1\t10\t50\t0.01\t1000\t99\n"
+        path2convData+="12\tchr1\t190\t300\tsub1\t10\t50\t0.01\t1000\t99\n"
+                        
+        path2conv=open(self._pathfilename,"w")
+        path2conv.write(path2convData)
+        path2conv.close()
+        
+        self._db.createTable(self._pathtablename, "path", self._pathfilename)
+
+        pathResData="1\tchunk1\t10\t80\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="1\tchunk1\t90\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="1\tchunk2\t1\t21\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="2\tchunk2\t61\t71\tsub1\t10\t50\t0.01\t1000\t99\n"
+
+        pathResData+="3\tchunk1\t70\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="3\tchunk2\t1\t111\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="3\tchunk3\t1\t21\tsub1\t10\t50\t0.01\t1000\t99\n"
+        
+        pathResData+="4\tchunk1\t85\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="4\tchunk2\t1\t11\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="5\tchunk1\t85\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="5\tchunk2\t1\t21\tsub1\t10\t50\t0.01\t1000\t99\n"
+        
+        pathResData+="6\tchunk1\t10\t80\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="6\tchunk1\t90\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="6\tchunk2\t1\t21\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="7\tchunk2\t61\t71\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="8\tchunk2\t101\t111\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="8\tchunk3\t1\t111\tsub1\t10\t50\t0.01\t1000\t99\n"
+        
+        pathResData+="9\tchunk1\t70\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="9\tchunk2\t1\t111\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="9\tchunk3\t1\t21\tsub1\t10\t50\t0.01\t1000\t99\n"
+        
+        pathResData+="10\tchunk1\t85\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="10\tchunk2\t1\t11\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="11\tchunk1\t85\t100\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="11\tchunk2\t1\t21\tsub1\t10\t50\t0.01\t1000\t99\n"
+        pathResData+="12\tchunk2\t101\t111\tsub1\t10\t50\t0.01\t1000\t99\n"       
+        pathResData+="12\tchunk3\t1\t111\tsub1\t10\t50\t0.01\t1000\t99\n"       
+                
+        pathRes=open(self._resfilename,"w")
+        pathRes.write(pathResData)
+        pathRes.close()
+        
+    def tearDown(self):
+        self._db.dropTable(self._chunkmaptable)
+        self._db.dropTable(self._pathtablename)
+        self._db.close()
+        os.remove(self._resfilename)
+        os.remove(self._pathfilename)
+        os.remove(self._chunkmapfilename)
+
+    def test_convert(self):
+        conv=ConvPathChr2Chunk(self._db,self._pathtablename, self._chunkmaptable, self._pathtablename+"_onchk")
+        conv.convert()
+        expPath = self._resfilename
+        obsPath = "dummy_path.onchk"
+        self._db.exportDataToFile("dummy_path_onchk", obsPath)
+        self._db.dropTable("dummy_path_onchk")
+        self.assertTrue(FileUtils.are2FilesIdentical(expPath, obsPath))
+        os.remove(obsPath)
+
+test_suite = unittest.TestSuite()
+test_suite.addTest( unittest.makeSuite( Test_ConvPathChr2Chunk ) )
+if __name__ == '__main__':
+    unittest.TextTestRunner(verbosity=2).run( test_suite )
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