Mercurial > repos > damion > blast_reporting
comparison tool-data/blast_reporting_fields.loc.sample @ 0:7db7ecc78ad6 draft
Uploaded
| author | damion |
|---|---|
| date | Mon, 02 Mar 2015 20:46:00 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:7db7ecc78ad6 |
|---|---|
| 1 #value type subtype sort filter default min max choose short_name name | |
| 2 # Remember to edit tool_data_table_conf.xml for column spec! | |
| 3 length numeric int 1 1 1 Length Alignment length | |
| 4 qstart numeric int 1 1 1 Q. Start Alignment start in query | |
| 5 qend numeric int 1 1 1 Q. End Alignment end in query | |
| 6 sstart numeric int 1 1 1 S. Start Alignment start in subject | |
| 7 send numeric int 1 1 1 S. End Alignment end in subject | |
| 8 qseq text atgc 0 1 1 Q. Alignment Aligned part of query sequence | |
| 9 sseq text atgc 0 1 1 S. Alignment Aligned part of subject sequence | |
| 10 mseq text atgc 0 1 1 Alignment Alignment, matched part | |
| 11 # | |
| 12 bitscore numeric int 1 1 1 Bit Score Bit score | |
| 13 evalue numeric float 1 1 1 E-value Expectation value | |
| 14 pcov numeric int 1 1 1 % Coverage % coverage | |
| 15 gapopen numeric int 1 1 1 Gaps-openings # of gap openings | |
| 16 gaps numeric int 1 1 1 Gaps Total number of gaps | |
| 17 mismatch numeric int 1 1 1 Mismatches # of mismatches | |
| 18 nident numeric int 1 1 1 Ident. Matches # of identical matches | |
| 19 positive numeric int 1 1 1 Pos. Matches # of positive-scoring matches | |
| 20 pident numeric float 1 1 97 90 100 1 % Identical % of identical matches | |
| 21 ppos numeric float 1 1 1 % Positive % of positive-scoring matches | |
| 22 score numeric int 1 1 1 Raw Score Raw Score | |
| 23 # | |
| 24 qseqid text int 1 1 1 Query Id Query sequence id | |
| 25 qframe numeric int 1 1 1 Query Frame Query frame | |
| 26 qlen numeric int 1 1 1 Query Length Query sequence length | |
| 27 # | |
| 28 accessionid text 1 1 1 Accession Subject accession id | |
| 29 sframe numeric int 1 1 1 Subject Frame Subject frame | |
| 30 sallseqdescr text 0 1 1 Subject Descriptions Subject sequence desc(s) (all) | |
| 31 sseqdescr text 1 1 1 Subject Description Subject sequence desc. (first) | |
| 32 sseqid text int 1 1 1 Subject Id Subject sequence id | |
| 33 sallseqid text 1 1 1 Subject Ids Subject sequence ids (all) | |
| 34 slen numeric int 1 1 1 Subject Length Subject sequence length |