Mercurial > repos > erick-antezana > onto-toolkit
comparison onto-toolkit/suite_config.xml @ 0:4484575e4186
Migrated tool version 0.1 from old tool shed archive to new tool shed repository
| author | erick-antezana |
|---|---|
| date | Tue, 07 Jun 2011 17:51:45 -0400 |
| parents | |
| children | d2d26d330236 |
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| -1:000000000000 | 0:4484575e4186 |
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| 1 <suite id="ONTO-ToolKit" name="Suite of OBO Ontology manipulation tools" version="0.1"> | |
| 2 <description>This suite contains tools for managing ontologies that are represented in the OBO flat file format</description> | |
| 3 | |
| 4 <tool id="get_ancestor_terms" name="Get the ancestor terms of a given OBO term" version="1.22"> | |
| 5 <description> Collects the ancestor terms from a given term in the given OBO ontology</description> | |
| 6 </tool> | |
| 7 | |
| 8 <tool id="get_child_terms" name="Get the child terms of a given OBO term" version="1.22"> | |
| 9 <description>Collects the child terms from a given term in the given OBO ontology</description> | |
| 10 </tool> | |
| 11 | |
| 12 <tool id="get_descendent_terms" name="Get the descendent terms of a given OBO term" version="1.22"> | |
| 13 <description>Collects the descendent terms from a given term in the given OBO ontology</description> | |
| 14 </tool> | |
| 15 | |
| 16 <tool id="get_intersection_ontology_from" name="Gets an intersection ontology from given OBO ontologies" version="1.22"> | |
| 17 <description>Provides an intersection of the given ontologies (in OBO format)</description> | |
| 18 </tool> | |
| 19 | |
| 20 <tool id="get_list_intersection_from" name="Get the overlapping terms from a given set OBO terms" version="1.22"> | |
| 21 <description>Collects common OBO terms from a given set of list containing OBO terms</description> | |
| 22 </tool> | |
| 23 | |
| 24 <tool id="get_parent_terms" name="Get the parent terms of a given OBO term" version="1.22"> | |
| 25 <description>Collects the parent terms from a given term in the given OBO ontology</description> | |
| 26 </tool> | |
| 27 | |
| 28 <tool id="get_relationship_types" name="Get all the relationship types in an ontology" version="1.22"> | |
| 29 <description>Collects the relationship types in the given OBO ontology</description> | |
| 30 </tool> | |
| 31 | |
| 32 <tool id="get_subontology_from" name="Get subontology from a given OBO term" version="1.22"> | |
| 33 <description>Extracts a subontology (in OBO format) of a given ontology having as root node the provided term ID</description> | |
| 34 </tool> | |
| 35 | |
| 36 <tool id="obo2owl" name="Convert OBO to OWL" version="1.22"> | |
| 37 <description>Converts an OBO formatted ontology to OWL format</description> | |
| 38 </tool> | |
| 39 | |
| 40 <tool id="obo2rdf" name="Convert OBO to RDF" version="1.22"> | |
| 41 <description>Converts an OBO formatted ontology to RDF/XML format</description> | |
| 42 </tool> | |
| 43 | |
| 44 <tool id="obo2tran" name="Convert OBO to RDF (tc)" version="1.22"> | |
| 45 <description>Converts an OBO formatted ontology to RDF/XML format with transitive closure</description> | |
| 46 </tool> | |
| 47 | |
| 48 <tool id="term_id_vs_term_def" name="Get all the term IDs and term definitions of a given OBO ontology" version="1.22"> | |
| 49 <description>Get all the term IDs and term definitions of a given OBO ontology</description> | |
| 50 </tool> | |
| 51 | |
| 52 <tool id="term_id_vs_term_name" name="Get all the term IDs and term names of a given OBO ontology" version="1.22"> | |
| 53 <description>Get all the term IDs and term names of a given OBO ontology</description> | |
| 54 </tool> | |
| 55 </suite> |