Mercurial > repos > erick-antezana > onto-toolkit

annotate onto-toolkit/suite_config.xml @ 0:4484575e4186

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Migrated tool version 0.1 from old tool shed archive to new tool shed repository
author erick-antezana
date Tue, 07 Jun 2011 17:51:45 -0400
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children d2d26d330236
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4484575e4186 Migrated tool version 0.1 from old tool shed archive to new tool shed repository
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1 <suite id="ONTO-ToolKit" name="Suite of OBO Ontology manipulation tools" version="0.1">
4484575e4186 Migrated tool version 0.1 from old tool shed archive to new tool shed repository
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2 <description>This suite contains tools for managing ontologies that are represented in the OBO flat file format</description>
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4 <tool id="get_ancestor_terms" name="Get the ancestor terms of a given OBO term" version="1.22">
4484575e4186 Migrated tool version 0.1 from old tool shed archive to new tool shed repository
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5 <description> Collects the ancestor terms from a given term in the given OBO ontology</description>
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6 </tool>
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7
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8 <tool id="get_child_terms" name="Get the child terms of a given OBO term" version="1.22">
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9 <description>Collects the child terms from a given term in the given OBO ontology</description>
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10 </tool>
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12 <tool id="get_descendent_terms" name="Get the descendent terms of a given OBO term" version="1.22">
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13 <description>Collects the descendent terms from a given term in the given OBO ontology</description>
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14 </tool>
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16 <tool id="get_intersection_ontology_from" name="Gets an intersection ontology from given OBO ontologies" version="1.22">
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17 <description>Provides an intersection of the given ontologies (in OBO format)</description>
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18 </tool>
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20 <tool id="get_list_intersection_from" name="Get the overlapping terms from a given set OBO terms" version="1.22">
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21 <description>Collects common OBO terms from a given set of list containing OBO terms</description>
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22 </tool>
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23
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24 <tool id="get_parent_terms" name="Get the parent terms of a given OBO term" version="1.22">
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25 <description>Collects the parent terms from a given term in the given OBO ontology</description>
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26 </tool>
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28 <tool id="get_relationship_types" name="Get all the relationship types in an ontology" version="1.22">
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29 <description>Collects the relationship types in the given OBO ontology</description>
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30 </tool>
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31
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32 <tool id="get_subontology_from" name="Get subontology from a given OBO term" version="1.22">
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33 <description>Extracts a subontology (in OBO format) of a given ontology having as root node the provided term ID</description>
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34 </tool>
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35
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36 <tool id="obo2owl" name="Convert OBO to OWL" version="1.22">
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37 <description>Converts an OBO formatted ontology to OWL format</description>
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38 </tool>
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39
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40 <tool id="obo2rdf" name="Convert OBO to RDF" version="1.22">
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41 <description>Converts an OBO formatted ontology to RDF/XML format</description>
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42 </tool>
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43
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44 <tool id="obo2tran" name="Convert OBO to RDF (tc)" version="1.22">
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45 <description>Converts an OBO formatted ontology to RDF/XML format with transitive closure</description>
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46 </tool>
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4484575e4186 Migrated tool version 0.1 from old tool shed archive to new tool shed repository
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48 <tool id="term_id_vs_term_def" name="Get all the term IDs and term definitions of a given OBO ontology" version="1.22">
4484575e4186 Migrated tool version 0.1 from old tool shed archive to new tool shed repository
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49 <description>Get all the term IDs and term definitions of a given OBO ontology</description>
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50 </tool>
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4484575e4186 Migrated tool version 0.1 from old tool shed archive to new tool shed repository
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52 <tool id="term_id_vs_term_name" name="Get all the term IDs and term names of a given OBO ontology" version="1.22">
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53 <description>Get all the term IDs and term names of a given OBO ontology</description>
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54 </tool>
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55 </suite>