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1 <?xml version="1.0" ?>
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2 <tool id="qiime_phylogeny_midpoint-root" name="qiime phylogeny midpoint-root" version="2019.4">
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3 <description> - Midpoint root an unrooted phylogenetic tree.</description>
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4 <requirements>
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5 <requirement type="package" version="2019.4">qiime2</requirement>
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6 </requirements>
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7 <command><![CDATA[
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8 qiime phylogeny midpoint-root
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9
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10 --i-tree=$itree
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11
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12 --o-rooted-tree=orootedtree
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13 ;
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14 cp orootedtree.qza $orootedtree
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15 ]]></command>
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16 <inputs>
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17 <param format="qza,no_unzip.zip" label="--i-tree: ARTIFACT Phylogeny[Unrooted] The phylogenetic tree to be rooted. [required]" name="itree" optional="False" type="data"/>
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18 </inputs>
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19 <outputs>
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20 <data format="qza" label="${tool.name} on ${on_string}: rootedtree.qza" name="orootedtree"/>
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21 </outputs>
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22 <help><![CDATA[
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23 Midpoint root an unrooted phylogenetic tree.
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24 ############################################
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25
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26 Midpoint root an unrooted phylogenetic tree.
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27
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28 Parameters
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29 ----------
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30 tree : Phylogeny[Unrooted]
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31 The phylogenetic tree to be rooted.
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32
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33 Returns
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34 -------
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35 rooted_tree : Phylogeny[Rooted]
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36 The rooted phylogenetic tree.
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37 ]]></help>
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38 <macros>
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39 <import>qiime_citation.xml</import>
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40 </macros>
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41 <expand macro="qiime_citation"/>
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42 </tool>
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