diff test-data/kraken_test/test1_csv.log @ 1:fe733f05c2f8 draft

planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/recentrifuge commit 9142693589056424fb64869b69dbc08b179f57ee
author iuc
date Fri, 26 Aug 2022 10:57:30 +0000
parents 09b7b0b2e2c2
children 12f0968f171c
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line diff
--- a/test-data/kraken_test/test1_csv.log	Mon Jun 27 11:03:22 2022 +0000
+++ b/test-data/kraken_test/test1_csv.log	Fri Aug 26 10:57:30 2022 +0000
@@ -1,13 +1,14 @@
 
-=-= /home/pierre/anaconda3/envs/__recentrifuge@1.8.1/bin/rcf =-= v1.8.1 - Mar 2022 =-= by Jose Manuel Martí =-=
+=-= /home/pierre/anaconda3/envs/__recentrifuge@1.9.1/bin/rcf =-= v1.9.1 - Jun 2022 =-= by Jose Manuel Martí =-=
 
+Kraken .krk files to analyze: ['input_dir/kraken_out.krk']
 Loading NCBI nodes... OK! 
 Loading NCBI names... OK! 
 Building dict of parent to children taxa... OK! 
 
 Please, wait, processing files in parallel...
 
-Loading output file /tmp/tmpz5ieggzi/files/d/5/5/dataset_d55a31f8-0f74-4938-9a4f-dce196b7467b.dat... OK!
+Loading output file input_dir/kraken_out.krk... OK!
   Seqs read: 99	[52.81 knt]
   Seqs clas: 99	(0.00% unclassified)
   Seqs pass: 99	(0.00% rejected)
@@ -20,8 +21,8 @@
   Info: 90 additional seqs discarded (90.909% of accepted)
 
   Warning! 11 orphan taxids (rerun with --debug for details)
-/tmp/tmpz5ieggzi/files/d/5/5/dataset_d55a31f8-0f74-4938-9a4f-dce196b7467b sample OK!
-Load elapsed time: 0.0028 sec
+input_dir/kraken_out sample OK!
+Load elapsed time: 0.00392 sec
 
 
 Building the taxonomy multiple tree... OK!