Mercurial > repos > jbarberoaparicio > roary

changeset 14:0d73c38f61b3 draft

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Uploaded
author jbarberoaparicio
date Wed, 17 Apr 2019 05:54:29 -0400
parents 9c482532a3e0
children 0dd8dd02c220
files roary/myTools/roary_tool.xml
diffstat 1 files changed, 4 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/roary/myTools/roary_tool.xml	Wed Apr 17 05:51:25 2019 -0400
+++ b/roary/myTools/roary_tool.xml	Wed Apr 17 05:54:29 2019 -0400
@@ -7,7 +7,10 @@
     
     <command detect_errors="exit_code"><![CDATA[
         
-               
+        #for $counter, $gff in enumerate($gff_input.gffs)
+          cp $gff ${gff}.gff &&
+        #end for
+                
         roary
           -f out 
           -p \${GALAXY_SLOTS:-1}