Mercurial > repos > jbarberoaparicio > roary

changeset 26:6fd4d3fce229 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author jbarberoaparicio
date Thu, 18 Apr 2019 05:37:59 -0400
parents 1b990096bb59
children e22ca5c843c2
files roary/myTools/roary_tool.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/roary/myTools/roary_tool.xml	Thu Apr 18 05:23:39 2019 -0400
+++ b/roary/myTools/roary_tool.xml	Thu Apr 18 05:37:59 2019 -0400
@@ -7,8 +7,8 @@
     
     <command detect_errors="exit_code"><![CDATA[
         
-        #for $counter, $gff in enumerate($gff_input.gffs) sample="$(cut -d'/' -f6 <<<'$gff')" && 
-            cp $gff ${sample}.gff &&
+        #for $counter, $gff in enumerate($gff_input.gffs)
+            cp $gff ${counter}.gff &&
         #end for
                 
         roary