Mercurial > repos > jjohnson > qiime
view collate_alpha.xml @ 0:e5c3175506b7 default tip
Initial tool configs for qiime, most need work.
author | Jim Johnson <jj@umn.edu> |
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date | Sun, 17 Jul 2011 10:30:11 -0500 |
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<tool id="collate_alpha" name="collate_alpha" version="1.2.0"> <description>Collate alpha diversity results</description> <requirements> <requirement type="binary">collate_alpha.py</requirement> </requirements> <command interpreter="python"> qiime_wrapper.py --galaxy_tmpdir='$__new_file_path__' collate_alpha.py --input_path=$input_path --output_path=$output_path --example_path=$example_path </command> <inputs> <param name="input_path" type="text" label="input_path" help="input path (a directory) [REQUIRED]"/> <param name="example_path" type="text" label="example_path" help="example alpha_diversity analysis file, containing all samples and all metrics to be included in the collated result[Default: chosen automatically (see usage string)]"/> </inputs> <outputs> <data format="txt" name="output_path"/> </outputs> <tests> </tests> <help> </help> </tool>