Mercurial > repos > jjohnson > qiime
view consensus_tree.xml @ 0:e5c3175506b7 default tip
Initial tool configs for qiime, most need work.
author | Jim Johnson <jj@umn.edu> |
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date | Sun, 17 Jul 2011 10:30:11 -0500 |
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<tool id="consensus_tree" name="consensus_tree" version="1.2.0"> <description>This script outputs a majority consensus tree given a collection of input trees.</description> <requirements> <requirement type="binary">consensus_tree.py</requirement> </requirements> <command interpreter="python"> qiime_wrapper.py --galaxy_tmpdir='$__new_file_path__' consensus_tree.py --input_dir=$input_dir --output_fname=$output_fname $strict </command> <inputs> <param name="input_dir" type="text" label="input_dir" help="input folder containing trees [REQUIRED]"/> <param name="strict" type="boolean" truevalue="--strict" falsevalue="" checked="false" label="strict" help="Use only nodes occurring }50% of the time [default: False]"/> </inputs> <outputs> <data format="txt" name="output_fname"/> </outputs> <tests> </tests> <help> </help> </tool>