diff concatenate_ordered.bash @ 0:fd3ea97a96bc draft

planemo upload commit 103cb51ec368438642504c3f98b76c363db478bb
author kyost
date Sat, 28 Apr 2018 15:07:26 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/concatenate_ordered.bash	Sat Apr 28 15:07:26 2018 -0400
@@ -0,0 +1,18 @@
+#!/bin/bash
+
+input1=$1
+output1=$2
+
+echo $input1 |tr , '\n' > input_series
+
+cat input_series | while read file
+do
+	cat $file >> count_list
+done
+
+sort -k1 count_list > sorted_list
+cut -f 2 sorted_list > $output1
+
+rm input_series
+rm count_list
+rm sorted_list