--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/genephys/MergeBlastResults.xml	Fri Oct 24 05:54:20 2014 -0400
@@ -0,0 +1,21 @@
+<tool id="MergeBlastResults" name="MergeBlastResults" version="1.03">
+<description>Parse Blast result (Tabular) to merge feature</description>
+<command interpreter="perl">
+    MergeBlastResults.pl -input_blasttab_file $input_blast -output_joinmatch_file $output_merge -log_file $log_file -max_overlap_fraction $max_overlap_fraction -max_overlap_length_ignored $max_overlap_length_ignored -header $header
+</command>
+<inputs>
+	<param name="input_blast"  type="data" format="txt" label="Select a suitable input BLASTTAB (10 columns) file from your history"/>
+	<param name="max_overlap_fraction" type="float" value="0.5" label="Maximum overlap fraction between two match (other wise considered as duplicated)"/>
+	<param name="max_overlap_length_ignored" type="integer" value="3" label="Maximum overlap length ignored"/>
+	<param name="header" type="text" value="" label="Header for the blast file"/>
+</inputs>
+<outputs>
+	<data name="output_merge" format="txt" label="${tool.name} MERGE on ${on_string}"/>
+	<data name="log_file" format="txt" label="${tool.name} LOG on ${on_string}"/>
+</outputs>
+
+<help>
+
+</help>
+</tool>
+