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annotate tool_dependencies.xml @ 5:4bc49a5769ee draft

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Version 0.5: Split interleaved SSCS output file into two paired files.
author nick
date Thu, 01 Dec 2016 23:22:52 -0500
parents 7f513b9b1b1e
children 9a0bee12b583
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="mafft" version="7.221">
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4 <repository changeset_revision="15974dd17515" name="mafft" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" />
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5 </package>
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6 <package name="duplex" version="0.5">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_by_url">https://github.com/galaxyproject/dunovo/archive/v0.5.tar.gz</action>
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10 <action type="shell_command">make</action>
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11 <action type="move_directory_files">
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12 <source_directory>.</source_directory>
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13 <destination_directory>$INSTALL_DIR</destination_directory>
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14 </action>
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15 <action type="set_environment">
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16 <environment_variable action="set_to" name="DUPLEX_DIR">$INSTALL_DIR</environment_variable>
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17 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
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18 </action>
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19 </actions>
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20 </install>
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21 </package>
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22 </tool_dependency>