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1 <tool id="target_spy" name="Target Spy">
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2 <description>Find targets for miRNAs</description>
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3
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4 <requirements>
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5 <requirement type="perl-module">target_spy_wrapper.pl</requirement>
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6 </requirements>
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7
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8 <command interpreter="perl">
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9 ./target_spy_wrapper.pl $mirna_file $trans_file $targets
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10 </command>
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11
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12 <inputs>
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13 <param format="fasta" name="mirna_file" type="data" optional="false" label="miRNA file in Fasta format" />
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14 <param format="fasta" name="trans_file" type="data" optional="false" label="3' UTR transcript file in Fasta format" />
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15 </inputs>
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16
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17 <outputs>
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18 <data format="txt" name="targets"/>
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19 </outputs>
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20
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21 <help>
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22 </help>
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23 </tool>
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