Mercurial > repos > petr-novak > various_galaxy_tools
comparison gff2tabular.xml @ 0:696e702ebf74 draft
"planemo upload commit 0f6eca49bafc3c946189d793161a7f81d595e1a1-dirty"
| author | petr-novak |
|---|---|
| date | Mon, 09 May 2022 08:26:30 +0000 |
| parents | |
| children | 90c46e40d222 |
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| -1:000000000000 | 0:696e702ebf74 |
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| 1 <tool id="gff2tabular" name="GFF to Tabular" version="0.1.0"> | |
| 2 <description>converter</description> | |
| 3 <requirements> | |
| 4 <requirement type="package">R</requirement> | |
| 5 <requirement type="package">bioconductor-rtracklayer</requirement> | |
| 6 </requirements> | |
| 7 <command detect_errors="exit_code"><![CDATA[ | |
| 8 Rscript ${__tool_directory__}/gff2tabular.R '$inputgff' '$output' | |
| 9 ]]></command> | |
| 10 <inputs> | |
| 11 <param type="data" name="inputgff" format="gff" /> | |
| 12 </inputs> | |
| 13 <outputs> | |
| 14 <data name="output" format="tabular" /> | |
| 15 </outputs> | |
| 16 <help><![CDATA[ | |
| 17 Convert gff2/gff3 to tab delimited file | |
| 18 ]]></help> | |
| 19 </tool> |