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annotate gff2tabular.xml @ 0:696e702ebf74 draft

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"planemo upload commit 0f6eca49bafc3c946189d793161a7f81d595e1a1-dirty"
author petr-novak
date Mon, 09 May 2022 08:26:30 +0000
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children 90c46e40d222
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1 <tool id="gff2tabular" name="GFF to Tabular" version="0.1.0">
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2 <description>converter</description>
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3 <requirements>
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4 <requirement type="package">R</requirement>
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5 <requirement type="package">bioconductor-rtracklayer</requirement>
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6 </requirements>
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7 <command detect_errors="exit_code"><![CDATA[
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8 Rscript ${__tool_directory__}/gff2tabular.R '$inputgff' '$output'
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9 ]]></command>
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10 <inputs>
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11 <param type="data" name="inputgff" format="gff" />
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12 </inputs>
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13 <outputs>
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14 <data name="output" format="tabular" />
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15 </outputs>
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16 <help><![CDATA[
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17 Convert gff2/gff3 to tab delimited file
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18 ]]></help>
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19 </tool>