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annotate env/lib/python3.7/site-packages/cwltool/tests/seqtk_seq.cwl @ 2:6af9afd405e9 draft

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"planemo upload commit 0a63dd5f4d38a1f6944587f52a8cd79874177fc1"
author shellac
date Thu, 14 May 2020 14:56:58 -0400
parents 26e78fe6e8c4
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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26e78fe6e8c4 "planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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1 #!/usr/bin/env cwl-runner
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2 cwlVersion: v1.0
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3 class: CommandLineTool
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4 id: "seqtk_seq"
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5 doc: "Convert to FASTA (seqtk)"
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6 inputs:
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7 - id: input1
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8 type: File
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9 inputBinding:
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10 position: 1
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11 prefix: "-a"
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12 outputs:
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13 - id: output1
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14 type: File
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15 outputBinding:
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16 glob: out
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17 baseCommand: ["seqtk", "seq"]
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18 arguments: []
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19 stdout: out
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20 hints:
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21 SoftwareRequirement:
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22 packages:
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23 - package: seqtk
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24 version:
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25 - r93