Mercurial > repos > testtool > get_gr_set

annotate GRsetFromGEO/GRsetFromGEO.R @ 10:8fb59470e294 draft

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author testtool
date Tue, 13 Jun 2017 07:30:46 -0400
parents 6908c2998731
children bfc8b961afe1
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1 require("minfi", quietly = TRUE)
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3 options(warn = -1)
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4 options('download.file.method.GEOquery' = 'wget')
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6 args <- commandArgs(trailingOnly = TRUE)
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7 GSE = args[1]
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8 output = args[2]
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10 GRset <- getGenomicRatioSetFromGEO(GSE)
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12 save(GRset,file = output)