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drwxr-xr-x |
merge_feature_table_and_taxonomy.xml
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1203 |
-rw-r--r-- |
qiime_alignment_mafft.xml
|
1492 |
-rw-r--r-- |
qiime_alignment_mask.xml
|
3238 |
-rw-r--r-- |
qiime_citation.xml
|
782 |
-rw-r--r-- |
qiime_composition_add-pseudocount.xml
|
1754 |
-rw-r--r-- |
qiime_composition_ancom.xml
|
3936 |
-rw-r--r-- |
qiime_cutadapt_demux-paired.xml
|
3647 |
-rw-r--r-- |
qiime_cutadapt_demux-single.xml
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3728 |
-rw-r--r-- |
qiime_cutadapt_trim-paired.xml
|
9704 |
-rw-r--r-- |
qiime_cutadapt_trim-single.xml
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6663 |
-rw-r--r-- |
qiime_dada2_denoise-paired.xml
|
10454 |
-rw-r--r-- |
qiime_dada2_denoise-pyro.xml
|
8434 |
-rw-r--r-- |
qiime_dada2_denoise-single.xml
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7726 |
-rw-r--r-- |
qiime_deblur_denoise-16S.xml
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5209 |
-rw-r--r-- |
qiime_deblur_denoise-other.xml
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5595 |
-rw-r--r-- |
qiime_deblur_visualize-stats.xml
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1535 |
-rw-r--r-- |
qiime_demux_emp-paired.xml
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3883 |
-rw-r--r-- |
qiime_demux_emp-single.xml
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3913 |
-rw-r--r-- |
qiime_demux_summarize.xml
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2521 |
-rw-r--r-- |
qiime_diversity_alpha-correlation.xml
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2797 |
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qiime_diversity_alpha-group-significance.xml
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2379 |
-rw-r--r-- |
qiime_diversity_alpha-phylogenetic.xml
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2526 |
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qiime_diversity_alpha-rarefaction.xml
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6389 |
-rw-r--r-- |
qiime_diversity_alpha.xml
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3594 |
-rw-r--r-- |
qiime_diversity_beta-group-significance.xml
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4048 |
-rw-r--r-- |
qiime_diversity_beta-phylogenetic-alt.xml
|
5806 |
-rw-r--r-- |
qiime_diversity_beta-phylogenetic.xml
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2794 |
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qiime_diversity_beta-rarefaction.xml
|
8878 |
-rw-r--r-- |
qiime_diversity_beta.xml
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3115 |
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qiime_diversity_bioenv.xml
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2514 |
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qiime_diversity_core-metrics-phylogenetic.xml
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9730 |
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qiime_diversity_core-metrics.xml
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5992 |
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qiime_diversity_filter-distance-matrix.xml
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4137 |
-rw-r--r-- |
qiime_diversity_mantel.xml
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4612 |
-rw-r--r-- |
qiime_diversity_pcoa.xml
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1335 |
-rw-r--r-- |
qiime_diversity_procrustes-analysis.xml
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2284 |
-rw-r--r-- |
qiime_emperor_plot.xml
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2709 |
-rw-r--r-- |
qiime_emperor_procrustes-plot.xml
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3095 |
-rw-r--r-- |
qiime_feature-classifier_classify-consensus-blast.xml
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5438 |
-rw-r--r-- |
qiime_feature-classifier_classify-consensus-vsearch.xml
|
5128 |
-rw-r--r-- |
qiime_feature-classifier_classify-sklearn.xml
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4551 |
-rw-r--r-- |
qiime_feature-classifier_extract-reads.xml
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2666 |
-rw-r--r-- |
qiime_feature-classifier_fit-classifier-naive-bayes.xml
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8839 |
-rw-r--r-- |
qiime_feature-classifier_fit-classifier-sklearn.xml
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2859 |
-rw-r--r-- |
qiime_feature-table_core-features.xml
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3403 |
-rw-r--r-- |
qiime_feature-table_filter-features.xml
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5746 |
-rw-r--r-- |
qiime_feature-table_filter-samples.xml
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5689 |
-rw-r--r-- |
qiime_feature-table_filter-seqs.xml
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4414 |
-rw-r--r-- |
qiime_feature-table_group.xml
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4300 |
-rw-r--r-- |
qiime_feature-table_heatmap.xml
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17329 |
-rw-r--r-- |
qiime_feature-table_merge-seqs.xml
|
2058 |
-rw-r--r-- |
qiime_feature-table_merge-taxa.xml
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2076 |
-rw-r--r-- |
qiime_feature-table_merge.xml
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2522 |
-rw-r--r-- |
qiime_feature-table_presence-absence.xml
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1615 |
-rw-r--r-- |
qiime_feature-table_rarefy.xml
|
1949 |
-rw-r--r-- |
qiime_feature-table_relative-frequency.xml
|
1773 |
-rw-r--r-- |
qiime_feature-table_subsample.xml
|
2608 |
-rw-r--r-- |
qiime_feature-table_summarize.xml
|
2384 |
-rw-r--r-- |
qiime_feature-table_tabulate-seqs.xml
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1635 |
-rw-r--r-- |
qiime_gneiss_add-pseudocount.xml
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1730 |
-rw-r--r-- |
qiime_gneiss_assign-ids.xml
|
2248 |
-rw-r--r-- |
qiime_gneiss_balance-taxonomy.xml
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5353 |
-rw-r--r-- |
qiime_gneiss_correlation-clustering.xml
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1883 |
-rw-r--r-- |
qiime_gneiss_dendrogram-heatmap.xml
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8813 |
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qiime_gneiss_gradient-clustering.xml
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3519 |
-rw-r--r-- |
qiime_gneiss_ilr-transform.xml
|
2326 |
-rw-r--r-- |
qiime_gneiss_lme-regression.xml
|
3542 |
-rw-r--r-- |
qiime_gneiss_ols-regression.xml
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3469 |
-rw-r--r-- |
qiime_longitudinal_first-differences.xml
|
6464 |
-rw-r--r-- |
qiime_longitudinal_first-distances.xml
|
5960 |
-rw-r--r-- |
qiime_longitudinal_linear-mixed-effects.xml
|
7195 |
-rw-r--r-- |
qiime_longitudinal_nmit.xml
|
3915 |
-rw-r--r-- |
qiime_longitudinal_pairwise-differences.xml
|
8070 |
-rw-r--r-- |
qiime_longitudinal_pairwise-distances.xml
|
7646 |
-rw-r--r-- |
qiime_longitudinal_volatility.xml
|
4841 |
-rw-r--r-- |
qiime_metadata_distance-matrix.xml
|
2477 |
-rw-r--r-- |
qiime_metadata_tabulate.xml
|
2430 |
-rw-r--r-- |
qiime_phylogeny_fasttree.xml
|
1518 |
-rw-r--r-- |
qiime_phylogeny_filter-table.xml
|
1919 |
-rw-r--r-- |
qiime_phylogeny_midpoint-root.xml
|
1381 |
-rw-r--r-- |
qiime_quality-control_evaluate-composition.xml
|
9480 |
-rw-r--r-- |
qiime_quality-control_evaluate-seqs.xml
|
3035 |
-rw-r--r-- |
qiime_quality-control_exclude-seqs.xml
|
4880 |
-rw-r--r-- |
qiime_quality-filter_q-score-joined.xml
|
3852 |
-rw-r--r-- |
qiime_quality-filter_q-score.xml
|
3850 |
-rw-r--r-- |
qiime_sample-classifier_classify-samples.xml
|
9636 |
-rw-r--r-- |
qiime_sample-classifier_maturity-index.xml
|
9122 |
-rw-r--r-- |
qiime_sample-classifier_regress-samples.xml
|
8055 |
-rw-r--r-- |
qiime_taxa_barplot.xml
|
3607 |
-rw-r--r-- |
qiime_taxa_collapse.xml
|
3207 |
-rw-r--r-- |
qiime_taxa_filter-seqs.xml
|
5753 |
-rw-r--r-- |
qiime_taxa_filter-table.xml
|
5804 |
-rw-r--r-- |
qiime_tools_export.xml
|
976 |
-rw-r--r-- |
qiime_tools_export_collection.xml
|
917 |
-rw-r--r-- |
qiime_tools_export_paired_collection.xml
|
936 |
-rw-r--r-- |
qiime_tools_import.xml
|
12030 |
-rw-r--r-- |
qiime_vsearch_cluster-features-closed-reference.xml
|
4797 |
-rw-r--r-- |
qiime_vsearch_cluster-features-de-novo.xml
|
3363 |
-rw-r--r-- |
qiime_vsearch_cluster-features-open-reference.xml
|
5513 |
-rw-r--r-- |
qiime_vsearch_dereplicate-sequences.xml
|
2161 |
-rw-r--r-- |
qiime_vsearch_join-pairs.xml
|
6028 |
-rw-r--r-- |
qiime_vsearch_uchime-denovo.xml
|
4045 |
-rw-r--r-- |
qiime_vsearch_uchime-ref.xml
|
4455 |
-rw-r--r-- |